miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|89478910|gb|DY634704.1|DY634704 TTTGGTCGCTGAGAAAAACTAAACTAATACACTTGAACAAAGTTATTTCTTCCCATGCGCATTTTCTCAGCAGCCAAACA
AACTAAACACACTTCAATCTCTCAAATTTCCGTACTGCAAACTGCAATCTCTGATTCTCCTTCTCTCTGCAGATGCCACC
TCGCCTTCCGCCCTCTCTGACAAATCGGCGAAGATCTTCGTCGCCGGTCACCGCGGACTTGTTGGCTCCGCCATCGTCCG
CAAGCTCCAAGCCCTAGGGTTCACCAACCTCGTCCTCCGTGGCCATGCCGAGCTGGACCTCACTCGCCAAAACGACGTCG
AGTCCTTCTTCGCCGTCGAAAAGCCCCAATTCGTCATCCTCGCCGCGGCAAAAGTTGGCGGCATTCACGCCAACAACACA
TACCCGGCTGATTTCATCGCCGTCAATCTCCAGATCCAGACCAATGTGATCGACGCCTCGTACCGATTCGGAGTCAAGAA
GCTCTTGTTTCTCGGCTCCTCTTGTATTTACCCCAAGTTCGCGCCACAGCCTATCCCCGAAAGCGCATTGTTAACGGGCC
CTCTGGAGCCCACAAATGAGTGGTATGCGA




Most similar to sp|Q9LMU0|FCL2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2
           OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1
          Length = 328

 Score =  244 bits (624), Expect = 2e-64
 Identities = 123/147 (83%), Positives = 132/147 (89%)
 Frame = +2

Query: 149 ADATSPSALSDKSAKIFVAGHRGLVGSAIVRKLQALGFTNLVLRGHAELDLTRQNDVESF 328
           ++  S S + +KSAKIFVAGHRGLVGSAIVRKLQ  GFTNLVLR H+ELDLT Q+DVESF
Sbjct: 7   SEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESF 66

Query: 329 FAVEKPQFVILAAAKVGGIHANNTYPADFIAVNLQIQTNVIDASYRFGVKKLLFLGSSCI 508
           FA EKP +VILAAAKVGGIHANNTYPADFI VNLQIQTNVI ++Y  GVKKLLFLGSSCI
Sbjct: 67  FATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCI 126

Query: 509 YPKFAPQPIPESALLTGPLEPTNEWYA 589
           YPKFAPQPIPESALLTGPLEPTNEWYA
Sbjct: 127 YPKFAPQPIPESALLTGPLEPTNEWYA 153